Fetches Reactome pathways and their associated genes from
the `reactome.db` Bioconductor annotation package.
Usage
getReactomeGmt(speciesDb, verbose = TRUE)
Arguments
- speciesDb
An AnnotationDb object for the target species (e.g.,
`org.Hs.eg.db`). This is used to filter pathways for the correct species.
- verbose
A logical value indicating whether to print progress messages.
Value
A named list where names are Reactome pathway names and values are
character vectors of Entrez IDs.