Generate Node Attributes for a Complex Network

Creates a detailed attribute table for each complex, emphasizing functional specificity for network visualization, and assigns professional HCL colors.

Usage

generateNodeAttributes(
  complexes,
  enrichments,
  geneSetDb = NULL,
  similarityMethod = "jaccard",
  verbose = TRUE
)

Arguments

complexes

A named list of protein complexes.

enrichments

A named list of enrichment results. Must contain 'Fold'.

geneSetDb

Optional named list of gene sets for semantic clustering.

similarityMethod

Distance method for clustering ("jaccard", etc.).

verbose

Logical.

Value

A `tibble` with complex attributes.

Author

Qingzhou Zhang <zqzneptune@hotmail.com>